GitHub

Matlab functions designed for topological data analysis of ginkgo leaf image data

This repo contains matlab functions we wrote for topological data analysis of ginkgo leaves. All the matlab functions we wrote can be found in folder "my_functions_matlab". In the folder "leaf_images" ...
eLife

Readout and delayed transmission of initial afferent V1 activity in decisions about stimulus contrast

Evidence is provided suggesting that aggregate neural activity at an early stage of visual processing (V1) can directly contribute to perceptual decisions in humans.

Why simulating an entire cell cycle took years, multiple GPUs and six days per run

By simulating the life cycle of a minimal bacterial cell—from DNA replication to protein translation to metabolism and cell ...
eLife

A Coma Pattern-Based Autofocusing Method Resolves Bacterial Cold Shock Response at Single-Cell Level

Imaging-based single-cell physiological profiling holds great potential for uncovering fundamental bacterial cold shock response (CSR) mechanisms, but its application is impeded by severe focus drift ...
IEEE

Faster Region Based Convolutional Neural Network and VGG 16 for Multi-Class Tyre Defect Detection

Abstract: This paper intends to create a deep-learning architecture for training models over various defective tyre images until it has achieved intelligence to distinctly classify multi-class tyre ...
GitHub

PyRate is a program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework.

Silvestro D., Salamin N., Antonelli A., Meyer X. (2019) Improved estimation of macroevolutionary rates from fossil data using a Bayesian framework. Paleobiology, doi ...